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Ligand · G1P

G1P · 1-O-phosphono-alpha-D-glucopyranose

G1P, 1-O-phosphono-alpha-D-glucopyranose (C6 H13 O9 P, 260.1 g/mol), in the MolNFT structures on GenesisL1: bound in 9 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
G1P
Formula
C6 H13 O9 P
Class
ligand
Structures
9
PDB entries
7

Binding sites

G1P in 9 structures; the first of them:

  • 5H42 · Crystal Structure of 1,2-beta-oligoglucan phosphorylase from Lachnoclostridium… · G1P A1201 · binds ARG630, ASP631, TRP758, ASP759, ASP760, ARG916, GLU917, TYR922 and 5 more
  • 6GE9 · Structure of Mycobacterium tuberculosis GlmU bound to Glc-1P and Ac-CoA · G1P A502 · binds LYS371, PRO373, HIS374, ASN388
  • 6GH2 · Paenibacillus sp. YM1 laminaribiose phosphorylase with alpha-glc-1-phosphate bound · G1P A1002 · binds ARG353, ASN358, ARG374, TRP524, ASN525, ASP526, GLU732, PHE737 and 5 more
  • 6GE9 · Structure of mycobacterium tuberculosis glmu bound to glc-1P and ac- CoA · G1P A502 · binds PRO373, HIS374, ASN388
  • 6GH2 · Paenibacillus sp. YM1 laminaribiose phosphorylase with alpha-glc-1- phosphate bound · G1P A1002 · binds ARG353, ARG374, TRP524, ASN525, ASP526, GLU732, PHE737, HIS739 and 3 more
  • 6NNN · Xanthomonas citri dephospho-pgm in complex with glucose-1-phosphate · G1P A503 · binds ARG280, GLY302, HIS303, GLU320, SER322, HIS324, TYR326, ARG414 and 4 more
  • 6NNO · Xanthomonas citri phospho-pgm in complex with glucose-1-phosphate · G1P A502 · binds ARG280, GLY302, HIS303, GLU320, SER322, HIS324, TYR326, ARG414 and 4 more
  • 6SNO · Crystal structures of human PGM1 isoform 2 · G1P A602 · binds SER38, SEP135, ARG311, THR375, GLU394, SER396, ARG521, SER523 and 4 more
  • 6Y8Y · Structure of baltic herring (clupea harengus) phosphoglucomutase 5 (PGM5) with bound… · G1P A603 · binds THR23, ASN24, SEP121, ARG297, GLY362, GLU380, GLU381, SER382 and 6 more

Residues it binds most

ARG 11, SER 8, GLU 11, HIS 10, ASN 9, ASP 6, THR 8, GLY 8, TYR 5, TRP 6 (residue and the binding sites it lines).

Found with

  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether
  • MG · Magnesium ion
  • ACO · Acetyl coenzyme *A
  • CA · Calcium ion
  • CL · Chloride ion
  • SO4 · Sulfate ion
  • NA · Sodium ion
  • NI · Nickel (II) ion
  • ZN · Zinc ion
  • GLC · alpha-D-glucopyranose
  • ACT · Acetate ion

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