GL1X · GenesisL1 explorer

Ligand · EVM

EVM · L-Serine, N-[[3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]-4-pyridinyl]methylene]

EVM, L-Serine, N-[[3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]-4-pyridinyl]methylene] (C11 H14 N2 O8 P -1, 333.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within…

Component
EVM
Formula
C11 H14 N2 O8 P -1
Class
ligand
Structures
2
PDB entries
2

Binding sites

EVM in 2 structures; the first of them:

  • 6C2Q · Crystal Structures of Cystathionine beta-Synthase from Saccharomyces cerevisiae: the… · EVM A501 · binds LYS53, THR81, SER82, GLY83, ASN84, THR85, GLN157, TYR158 and 16 more
  • 6TGH · SHMT from Streptococcus thermophilus Tyr55Thr variant in complex with D-Serine both as… · EVM A502 · binds SER35, SER97, GLY98, SER99, ASN102, HIS126, HIS129, ALA175 and 13 more

Residues it binds most

GLY 3, SER 3, HIS 3, THR 3, ALA 3, TYR 3, ASN 3, ASP 3, GLU 3, LYS 3 (residue and the binding sites it lines).

Found with

  • NA · Sodium ion
  • DSN · D-serine
  • PLP · Pyridoxal-5'-phosphate
  • CA · Calcium ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • PEG · Di(hydroxyethyl)ether
  • PGE · Triethylene glycol

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