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Ligand · ERE

ERE · 4-epi-vancosamine

ERE, 4-epi-vancosamine (C7 H15 N O3, 161.2 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
ERE
Formula
C7 H15 N O3
Class
sugar
Structures
8
PDB entries
4

Binding sites

ERE in 8 structures; the first of them:

  • 1HH3 · Decaplanin first P21-Form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHA · Decaplanin first P6122-Form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHC · Crystal structure of Decaplanin - space group P21, second form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHF · Decaplanin second P6122-Form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3, 3FG7
  • 1HH3 · Decaplanin first P21-form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHA · Decaplanin first P6122-form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHC · Crystal structure of decaplanin - space group P21, second form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3
  • 1HHF · Decaplanin second P6122-form · ERE A8 · binds OMX6, 3FG7, OMZ2, ASN3, 3FG7

Residues it binds most

3FG 32, OMX 32, ASN 28, OMZ 28 (residue and the binding sites it lines).

Found with

  • BGC · beta-D-glucopyranose
  • RAM · alpha-L-rhamnopyranose
  • GOL · Glycerol
  • CL · Chloride ion
  • PO4 · Phosphate ion
  • CIT · Citric acid
  • MLU · N-methyl-D-leucine

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