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Ligand · EMC

EMC · Ethyl mercury ion

EMC, Ethyl mercury ion (C2 H5 Hg +1, 229.7 g/mol), in the MolNFT structures on GenesisL1: bound in 11 records (8 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
EMC
Formula
C2 H5 Hg +1
Class
ligand
Structures
11
PDB entries
8

Binding sites

EMC in 11 structures; the first of them:

  • 5CV3 · C. remanei PGL-1 Dimerization Domain - Hg · EMC A501 · binds CYS354, TRP356
  • 5LF8 · Human Nucleoside diphosphate-linked moiety X motif 17 (NUDT17) · EMC A402 · binds CYS40, SER41, LEU42, SER58
  • 5LU8 · Crystal structure of yvad-cmk bound human legumain (aep) in complex with compound 11B · EMC A305 · binds CYS219, TYR220, TRP232, VAL235, ASN236
  • 6HP1 · Crystal Structure of the O-Methyltransferase from the trans-AT PKS multienzyme C0ZGQ3 of… · EMC A401 · binds THR1168, VAL1169, CYS1170, MET1181, ILE1185, VAL1198, LEU1371
  • 5LF8 · Human nucleoside diphosphate-linked moiety X motif 17 (NUDT17) · EMC A402 · binds CYS40, SER41, LEU42, SER58
  • 5LU8 · Crystal structure of yvad-cmk bound human legumain (aep) in complex with compound 11B · EMC A305 · binds CYS219, TYR220, TRP232, VAL235, ASN236
  • 6BZI · Crystal structure of halogenase pltm in complex with ethyl mercury and mercury · EMC A610 · binds ALA374, THR375, GLN378, CYS439, GLU448, PHE451
  • 6G4H · Crystal structure of the periplasmic domain of tgpa from pseudomonas aeruginosa bound to… · EMC A505 · binds ILE207, GLY211, TYR380, LEU382, CYS404, ALA447
  • 6HP1 · Crystal structure of the O-methyltransferase from the trans-at pks multienzyme C0ZGQ3 of… · EMC A401 · binds THR1168, VAL1169, CYS1170, MET1181, ILE1185, VAL1198, LEU1371
  • 6PII · The evolving story of atzt, a periplasmic binding protein · EMC A402 · binds GLN135, THR139, PHE157, ASN169, THR216, GLN217, ASN218, CYS238
  • 6Y6E · Drosophila unr CSD456 · EMC A301 · binds LEU220, CYS223, LYS225, PRO226

Residues it binds most

CYS 33, THR 14, GLY 10, ASN 10, LEU 10, GLN 6, VAL 8, ILE 8, SER 7, GLU 8 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion
  • 5KN · 2,4-di(morpholin-4-yl)aniline
  • CA · Calcium ion
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • SO4 · Sulfate ion
  • 0QE · Chloromethane
  • ACE · Acetyl group
  • GUN · Guanine
  • SNN · L-3-aminosuccinimide
  • HG · Mercury (II) ion
  • GOL · Glycerol

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