Ligand · DPR

DPR · D-proline

DPR, D-proline (C5 H9 N O2, 115.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: DPR
Formula: C5 H9 N O2
Class: ligand
Structures: 3
PDB entries: 3

Binding sites

DPR in 3 structures; the first of them:

1MCJ · Principles and pitfalls in designing site directed peptide ligands · DPR P6 · binds TYR34, TYR34, TYR93, HIS2
2EJ6 · Crystal analysis of delta1-pyrroline-5-carboxylate dehydrogenase from Thermus… · DPR A1517 · binds GLU137, PHE185, ILE189, LYS321, SER323, THR476, GLY477, ALA478 and 1 more
6X99 · Structure of proline utilization A with D-proline bound in the… · DPR A2007 · binds GLU674, PHE708, ILE712, ARG843, SER845, ILE1001, GLY1002, ALA1003 and 1 more

Residues it binds most

PHE 4, ILE 4, GLU 5, ALA 4, ARG 3, GLY 4, SER 4, LYS 3, THR 3, TYR 1 (residue and the binding sites it lines).

Found with

ACE · Acetyl group
DPN · D-phenylalanine
FAD · Flavin-adenine dinucleotide
NA · Sodium ion
NH2 · Amino group
SO4 · Sulfate ion
ACT · Acetate ion
MPD · (4S)-2-methyl-2,4-pentanediol
PGE · Triethylene glycol

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