Ligand · DLY
DLY · D-lysine
DLY, D-lysine (C6 H14 N2 O2, 146.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.
- Component
- DLY
- Formula
- C6 H14 N2 O2
- Class
- ligand
- Structures
- 5
- PDB entries
- 5
Binding sites
DLY in 5 structures; the first of them:
- 5XGX · Crystal structure of colwellia psychrerythraea strain 34H isoaspartyl dipeptidase E80Q… · DLY A404 · binds TYR140, ARG173, HIS205, HIS234, ARG237, PHE260, GLN266, ASP293 and 3 more
- 6A2F · Crystal structure of biosynthetic alanine racemase from Pseudomonas aeruginosa · DLY A402 · binds TYR254, TYR273, SER301, MET302, ASP303, MET304, LLP34, GLU80 and 3 more
- 6Y0X · Fucosylated antimicrobial peptide SB6 in complex with the lectin LecRSL from Ralstonia… · DLY A102 · binds ASP32, TYR37
- 7JPJ · Crystal Structure of the essential dimeric LYSA from Phaeodactylum tricornutum · DLY A501 · binds LYS275, VAL276, ARG278, THR317, ARG356, TYR360
- 8BSB · Vc1313-LBD bound to D-lysine · DLY A301 · binds ASN43, ASP47, THR48, ALA51, TYR102, THR105, VAL106, TRP107 and 4 more
Residues it binds most
TYR 8, ARG 5, ASP 7, MET 2, THR 3, ALA 2, ASN 2, GLU 4, HIS 2, LEU 4 (residue and the binding sites it lines).
Found with
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.