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Ligand · CAD

CAD · Cacodylic acid

CAD, Cacodylic acid (C2 H7 As O2, 138.0 g/mol), in the MolNFT structures on GenesisL1: bound in 19 records (17 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
CAD
Formula
C2 H7 As O2
Class
ligand
Structures
19
PDB entries
17

Binding sites

CAD in 19 structures; the first of them:

  • 7NSE · Bovine endothelial nitric oxide synthase, H4B-free, adma complex · CAD A950 · binds TRP324, LEU328, CYS384
  • 7SXP · G-quadruplex structure formed in the NRAS mRNA with a G8U substitution · CAD A104 · binds G4, G5, G9
  • 8EIF · Crystal structure of unmodified Pseudomonas aeruginosa protein PA0709 · CAD A411 · binds ASP10, ARG51, PHE85, ASP10, PHE85, ASP10, PHE85
  • 8FY0 · E3:PROTAC:target ternary complex structure (VCB/753b/BCL-xL) · CAD A301 · binds PHE76, CYS77, ASN78, ARG79, GLY104, THR105, GLY106, PHE148
  • 8V7P · Crystal structure of the truncated P1 pilin from Pseudomonas aeruginosa · CAD A201 · binds GLU39, PHE72, THR73, GLU74, SER75
  • 9NSE · Bovine endothelial nitric oxide synthase, ethyl-isoselenourea complex · CAD A950 · binds TRP324, CYS384
  • 5NSE · Bovine endothelial nitric oxide synthase, H4B-free, hydroxy-arg complex · CAD A950 · binds CYS384
  • 5VV8 · Structure of bovine endothelial nitric oxide synthase heme domain in complex with… · CAD B507 · binds LEU328, CAS384
  • 5WHI · Crystal structure of BCL-2-related protein A1 · CAD A201 · binds VAL62, SER63, VAL64, GLN107, THR114
  • 5YGE · Arga complexed with acecoa and glutamate · CAD A203 · binds ASP7, CYS8, HIS55, PRO56, MET87, HIS90
  • 6NSE · Bovine endothelial nitric oxide synthase, H4B-free, canavanine complex · CAD A950 · binds CYS384
  • 7CW1 · Crystal structure of a biodegradable plastic-degrading cutinase-like enzyme from the… · CAD A201 · binds ARG32, SER36, GLY37, GLY38, ALA139
  • 7CY3 · Crystal structure of a biodegradable plastic-degrading cutinase from paraphoma sp. B47-9. · CAD A201 · binds SER28, LEU67, ASN70, SER106, GLN107, THR136, HIS174
  • 7CZ0 · Crystal structure of a thermostable green fluorescent protein (tgp) with a synthetic… · CAD A304 · binds PRO142, SER143, THR144, ASP193, HIS194
  • 7EA4 · Crystal structure of L182E D-succinylase (dsa) from cupriavidus sp. P4-10-C · CAD A901 · binds HIS307, ARG713, HIS714, PRO715
  • 7MDP · KRAS G12C in complex with G-2897 · CAD H301 · binds SER65, ARG66, VAL67, THR68, SER82A
  • 7NSE · Bovine endothelial nitric oxide synthase, H4B-free, adma complex · CAD A950 · binds TRP324, LEU328, CYS384

Residues it binds most

CYS 20, LEU 15, GLU 11, SER 11, PRO 12, PHE 6, THR 11, TRP 9, ASN 10, ASP 6 (residue and the binding sites it lines).

Found with

  • GOL · Glycerol
  • ACT · Acetate ion
  • HEM · Protoporphyrin IX containing Fe
  • ZN · Zinc ion
  • H4B · 5,6,7,8-tetrahydrobiopterin
  • ISU · Se-ethyl-isoselenourea
  • NA · Sodium ion
  • 9P7 · 4-(2-{[(2-aminoquinolin-7-yl)methyl]amino}ethyl)-2-methylbenzonitrile
  • ACO · Acetyl coenzyme *A
  • CRQ · [2-(3-carbamoyl-1-imino-propyl)-4-(4-hydroxy-benzylidene)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid
  • DA2 · Ng,ng-dimethyl-L-arginine
  • GDP · Guanosine-5'-diphosphate

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