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Ligand · C2G

C2G · [cytidine-5'-phosphate] glycerylphosphoric acid ester

C2G, [cytidine-5'-phosphate] glycerylphosphoric acid ester (C12 H21 N3 O13 P2, 477.3 g/mol), in the MolNFT structures on GenesisL1: bound in 8 records (4 PDB entries). Every binding site with its residues within 4.5 Å, the residues it…

Component
C2G
Formula
C12 H21 N3 O13 P2
Class
ligand
Structures
8
PDB entries
4

Binding sites

C2G in 8 structures; the first of them:

  • 1N1D · Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol · C2G A130 · binds TYR7, GLY8, THR9, PHE10, HIS14, GLY16, HIS17, LEU20 and 17 more
  • 3L7K · Structure of the Wall Teichoic Acid Polymerase TagF, H444N + CDPG (15 minute soak) · C2G D730 · binds PHE360, ASP367, TRP443, ASN444, GLY445, THR446, PRO447, LYS449 and 14 more
  • 3L7L · Structure of the Wall Teichoic Acid Polymerase TagF, H444N + CDPG (30 minute soak) · C2G D730 · binds PHE360, TRP443, ASN444, GLY445, THR446, PRO447, LEU451, ARG511 and 10 more
  • 4Q7C · Structure of AF2299, a CDP-alcohol phosphotransferase · C2G A408 · binds ASP148, ALA152, ASN156, ARG157, PRO174, ASN175, THR178, SER211 and 13 more
  • 1N1D · Glycerol-3-phosphate cytidylyltransferase complexed with cdp-glycerol · C2G A130 · binds TYR7, GLY8, THR9, PHE10, HIS14, GLY16, HIS17, LEU20 and 17 more
  • 3L7K · Structure of the wall teichoic acid polymerase tagf, H444N + cdpg (15 minute soak) · C2G D730 · binds PHE360, ASP367, TRP443, ASN444, GLY445, THR446, PRO447, LYS449 and 14 more
  • 3L7L · Structure of the wall teichoic acid polymerase tagf, H444N + cdpg (30 minute soak) · C2G D730 · binds PHE360, TRP443, ASN444, GLY445, THR446, PRO447, LEU451, ARG511 and 10 more
  • 4Q7C · Structure of AF2299, a cdp-alcohol phosphotransferase · C2G A408 · binds ASP148, ALA152, ASN156, ARG157, PRO174, ASN175, THR178, SER211 and 13 more

Residues it binds most

ASP 16, GLY 16, ARG 16, THR 16, LYS 12, PHE 12, SER 16, TRP 12, HIS 10, ALA 8 (residue and the binding sites it lines).

Found with

  • SO4 · Sulfate ion
  • CL · Chloride ion
  • EDO · 1,2-ethanediol
  • EDT · {[-(bis-carboxymethyl-amino)-ethyl]-carboxymethyl-amino}-acetic acid
  • MPG · [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate
  • CA · Calcium ion
  • TLA · L(+)-tartaric acid

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