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Ligand · AXR

AXR · methyl alpha-D-arabinofuranoside

AXR, methyl alpha-D-arabinofuranoside (C6 H12 O5, 164.2 g/mol), in the MolNFT structures on GenesisL1: bound in 6 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
AXR
Formula
C6 H12 O5
Class
sugar
Structures
6
PDB entries
3

Binding sites

AXR in 6 structures; the first of them:

  • 3HNS · CS-35 Fab Complex with Oligoarabinofuranosyl Hexasaccharide · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more
  • 3HNT · CS-35 Fab complex with a linear, terminal oligoarabinofuranosyl tetrasaccharide from… · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more
  • 3HNV · CS-35 Fab Complex with Oligoarabinofuranosyl Tetrasaccharide (branch part of… · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more
  • 3HNS · Cs-35 Fab complex with oligoarabinofuranosyl hexasaccharide · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more
  • 3HNT · Cs-35 Fab complex with a linear, terminal oligoarabinofuranosyl tetrasaccharide from… · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more
  • 3HNV · Cs-35 Fab complex with oligoarabinofuranosyl tetrasaccharide (branch part of… · AXR A1 · binds PHE99, TYR102, VAL103, PRO104, TYR32, ASN34, TYR49, TYR50 and 1 more

Residues it binds most

TYR 6, ASN 6, ASP 6, PHE 6, PRO 6, VAL 6 (residue and the binding sites it lines).

Found with

  • BXX · beta-D-arabinofuranose
  • BXY · alpha-D-arabinofuranose

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