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Ligand · AME

AME · N-acetylmethionine

AME, N-acetylmethionine (C7 H13 N O3 S, 191.2 g/mol), in the MolNFT structures on GenesisL1: bound in 5 records (5 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
AME
Formula
C7 H13 N O3 S
Class
ligand
Structures
5
PDB entries
5

Binding sites

AME in 5 structures; the first of them:

  • 5X52 · Human serum albumin complexed with octanoate and N-acetyl-L-methionine · AME A601 · binds LYS195, ARG218, ARG222, ALA291, GLU292, VAL293, LYS436
  • 8UGI · High resolution in-situ structure of typeA supercomplex in respiratory chain… · AME 1h201 · binds THR198, MET2, SER3, ARG111, PRO121, TRP122, TYR123, TYR125
  • 8UGJ · In-situ structure of typeB supercomplex in respiratory chain (composite) · AME 1h201 · binds ASN197, ASN347, MET2, TYR83, ARG86, GLU107, ARG111, TRP122 and 1 more
  • 8UGN · In-situ structure of typeO supercomplex in respiratory chain (composite) · AME 1h201 · binds ASN197, ASN347, MET2, ARG86, GLU107, ARG111, TRP122, TYR123
  • 8UGR · In-situ structure of typeX supercomplex in respiratory chain (composite) · AME 1h201 · binds ASN197, ASN347, MET2, ARG86, GLU107, ARG111, TRP122, TYR123

Residues it binds most

ARG 8, ASN 5, TYR 6, GLU 6, MET 6, TRP 5, LYS 2, ALA 2, THR 2, PRO 1 (residue and the binding sites it lines).

Found with

  • PO4 · Phosphate ion
  • 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine
  • CDL · Cardiolipin
  • CUA · Dinuclear copper ion
  • EHZ · ~{S}-[2-[3-[[(2~{R})-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3~{S})-3-oxidanyltetradecanethioate
  • FES · Fe2/s2 (inorganic) cluster
  • FMN · Flavin mononucleotide
  • GTP · Guanosine-5'-triphosphate
  • HEA · Heme-A
  • HEC · Heme C
  • HEM · Protoporphyrin IX containing Fe
  • MYR · Myristic acid

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