Ligand · AH2
AH2 · 1-deoxy-alpha-D-mannopyranose
AH2, 1-deoxy-alpha-D-mannopyranose (C6 H12 O5, 164.2 g/mol), in the MolNFT structures on GenesisL1: bound in 9 records (7 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…
- Component
- AH2
- Formula
- C6 H12 O5
- Class
- ligand
- Structures
- 9
- PDB entries
- 7
Binding sites
AH2 in 9 structures; the first of them:
- 5MUC · Crystal structure of the FimH lectin domain in complex with 1,5-Anhydromannitol · AH2 A301 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 3 more
- 6LKN · Crystal structure of ATP11C-CDC50A in PtdSer-bound E2P state · AH2 C404
- 8GYY · Bifunctional xylosidase/glucosidase LXYL with intermediate substrate xylose, 120 seconds · AH2 J3 · binds VAL772, VAL773, GLN775
- 8OJO · Galectin-3 in complex with 2,6-Anhydro-5-S-(beta-D-galactopyranosyl)-5-thio-D-altritol · AH2 A304 · binds ARG162, GLU165, GLU184, ARG186
- 9DXT · Ligand-binding and transmembrane domains of kainate receptor GluK2 in complex with… · AH2 B1007 · binds THR730
- 5MUC · Crystal structure of the fimh lectin domain in complex with 1,5- anhydromannitol · AH2 A301 · binds PHE1, ILE13, ASN46, ASP47, TYR48, ILE52, ASP54, GLN133 and 3 more
- 6LKN · Crystal structure of ATP11C-CDC50A in ptdser-bound E2P state · AH2 C404
- 7BSU · Cryo-EM structure of a human ATP11C-CDC50A flippase in ptdser-bound E2BEF state · AH2 C403
- 8CYB · SARS-cov-2 spike protein in complex with a pan-sarbecovirus nanobody 1-8 · AH2 A1312
Residues it binds most
ASP 4, ASN 4, ILE 4, PHE 4, GLN 5, TYR 4, ARG 1, GLU 1, SER 2, THR 2 (residue and the binding sites it lines).
Found with
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
- MG · Magnesium ion
- BMA · beta-D-mannopyranose
- MAN · alpha-D-mannopyranose
- 2J9 · 4-cyclopropyl-7-fluoro-3,4-dihydro-2H-1,2,4-benzothiadiazine 1,1-dioxide
- A1BDT · N,N'-[butane-1,4-diylbis(azanediylpropane-3,1-diyl)]bis[3-(3,4-dihydroxyphenyl)propanamide]
- BKR · Deacetyltaxol
- CLR · Cholesterol
- POV · (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
- XLS · D-xylose
- YIO · 1-thio-beta-D-galactopyranose
- FUC · alpha-L-fucopyranose
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