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Ligand · AGV

AGV · (2R,3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidine-3,4-diol

AGV, (2R,3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidine-3,4-diol (C12 H17 N5 O3, 279.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its…

Component
AGV
Formula
C12 H17 N5 O3
Class
ligand
Structures
2
PDB entries
1

Binding sites

AGV in 2 structures; the first of them:

  • 4I71 · Crystal structure of the Trypanosoma brucei Inosine-Adenosine-Guanosine nucleoside… · AGV A401 · binds ASP10, ASN12, ASP14, ASP15, ASP40, PHE79, TRP83, THR137 and 10 more
  • 4I71 · Crystal structure of the trypanosoma brucei inosine-adenosine- guanosine nucleoside… · AGV A401 · binds ASP10, ASN12, ASP14, ASP15, ASP40, PHE79, TRP83, THR137 and 10 more

Residues it binds most

ASP 2, ASN 2, TRP 2, GLU 2, ARG 2, MET 2, PHE 2, THR 2, TYR 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • NI · Nickel (II) ion
  • TRS · 2-amino-2-hydroxymethyl-propane-1,3-diol

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