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Ligand · A1L01

A1L01 · (3~{S})-3-decanoyloxytetradecanoic acid

A1L01, (3~{S})-3-decanoyloxytetradecanoic acid (C24 H46 O4, 398.6 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
A1L01
Formula
C24 H46 O4
Class
ligand
Structures
2
PDB entries
2

Binding sites

A1L01 in 2 structures; the first of them:

  • 8WO1 · Cryo-EM Structure of Human TLR4/MD-2/DLAM5 Complex · A1L01 C205 · binds ILE32, ILE52, LEU54, ILE80, ARG90, PHE121, LYS122, ILE124 and 7 more
  • 8WSA · Cryo-EM Structure of Mouse TLR4/MD-2/DLAM5 Complex · A1L01 C206 · binds ILE32, ILE52, ARG90, PHE121, GLU122, ILE124, PHE126, TYR131 and 2 more

Residues it binds most

ILE 4, PHE 4, GLU 4, ARG 4, SER 4, TYR 4, GLN 2, LEU 2, LYS 2 (residue and the binding sites it lines).

Found with

  • 0IL · (3R)-3-(tetradecanoyloxy)tetradecanoic acid
  • 2IL · (3R)-3-(dodecanoyloxy)tetradecanoic acid
  • GP4 · 2-amino-2-deoxy-4-O-phosphono-alpha-D-glucopyranose
  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose
  • X6N · [(2~{R},3~{S},4~{R},5~{S})-2-(hydroxymethyl)-5-methoxy-4,6-bis(oxidanyl)oxan-3-yl] dihydrogen phosphate
  • BMA · beta-D-mannopyranose

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