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Ligand · 9MR

9MR · (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside

9MR, (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranoside (C12 H23 N O8, 309.3 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues within 4.5 Å, the…

Component
9MR
Formula
C12 H23 N O8
Class
sugar
Structures
1
PDB entries
1

Binding sites

9MR in 1 structure; the first of them:

  • 5VMA · Structure of B. pumilus GH48 in complex with a cellobio-derived isofagomine · 9MR A803 · binds ALA105, THR106, LEU121, GLU212, GLN219, TYR268, TRP309, TRP311

Residues it binds most

TRP 1, ALA 1, GLN 1, GLU 1, LEU 1, THR 1, TYR 1 (residue and the binding sites it lines).

Found with

  • G2I · (3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl 4-O-beta-D-glucopyranosyl-beta-D-glucopyranoside
  • CA · Calcium ion
  • NA · Sodium ion
  • ACT · Acetate ion
  • EDO · 1,2-ethanediol
  • MLI · Malonate ion

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