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Ligand · 9KH

9KH · 6-carboxy methyl-4-hydroxy-2-pyridinol

9KH, 6-carboxy methyl-4-hydroxy-2-pyridinol (C8 H9 N O4, 183.2 g/mol), in the MolNFT structures on GenesisL1: bound in 4 records (3 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands…

Component
9KH
Formula
C8 H9 N O4
Class
ligand
Structures
4
PDB entries
3

Binding sites

9KH in 4 structures; the first of them:

  • 5O4M · Fresh crystals of HcgC from Methanococcus maripaludis cocrystallized with SAH and… · 9KH A302 · binds THR113, GLY114, ILE115, PRO136, THR174, GLY176, MET178, THR179 and 4 more
  • 5O4J · Hcgc from methanococcus maripaludis cocrystallized with sah and pyridinol · 9KH B302 · binds ILE5, VAL9, LEU199, THR113, GLY114, ILE115, PRO136, THR174 and 3 more
  • 5O4M · Fresh crystals of hcgc from methanococcus maripaludis cocrystallized with sah and… · 9KH A302 · binds THR113, GLY114, ILE115, PRO136, THR174, GLY176, MET178, THR179 and 4 more
  • 5O4N · Apo hcgc from methanococcus maripaludis soaked with sah and pyridinol · 9KH A302 · binds THR113, GLY114, ILE115, PRO136, THR174, GLY176, MET178, THR179 and 3 more

Residues it binds most

THR 14, GLY 14, ILE 14, LEU 14, MET 14, PRO 14, VAL 14, SAH 6 (residue and the binding sites it lines).

Found with

  • DMS · Dimethyl sulfoxide
  • MPD · (4S)-2-methyl-2,4-pentanediol
  • PJL · (3~{E})-3-[(~{E})-3-oxidanylprop-2-enoyl]iminopropanoic acid
  • LI · Lithium ion
  • SO4 · Sulfate ion
  • PE4 · 2-{2-[2-(2-{2-[2-(2-ethoxy-ethoxy)-ethoxy]-ethoxy}-ethoxy)-ethoxy]-ethoxy}-ethanol

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