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Ligand · 8L5

8L5 · ~{N}-[(2~{S})-1-(aminomethylamino)-4-methyl-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid;hydrogen

8L5, ~{N}-[(2~{S})-1-(aminomethylamino)-4-methyl-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid;hydrogen (C16 H30 N4 O5 P, 389.4 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB…

Component
8L5
Formula
C16 H30 N4 O5 P
Class
ligand
Structures
2
PDB entries
1

Binding sites

8L5 in 2 structures; the first of them:

  • 5N3V · Thermolysin in complex with inhibitor JC292 · 8L5 E406 · binds ASN112, ALA113, PHE114, TRP115, ASN116, LEU133, VAL139, HIS142 and 7 more
  • 5N3V · Thermolysin in complex with inhibitor JC292 · 8L5 E406 · binds ASN112, ALA113, PHE114, TRP115, ASN116, LEU133, VAL139, HIS142 and 7 more

Residues it binds most

HIS 2, ASN 2, GLU 2, LEU 2, ALA 2, ARG 2, PHE 2, TRP 2, TYR 2, VAL 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • ZN · Zinc ion
  • DMS · Dimethyl sulfoxide
  • MPD · (4S)-2-methyl-2,4-pentanediol

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