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Ligand · 8GL

8GL · (2S)-2-azanyl-2-oxidanyl-pentanedioic acid

8GL, (2S)-2-azanyl-2-oxidanyl-pentanedioic acid (C5 H9 N O5, 163.1 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
8GL
Formula
C5 H9 N O5
Class
ligand
Structures
3
PDB entries
2

Binding sites

8GL in 3 structures; the first of them:

  • 5XWC · Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With… · 8GL A502 · binds LYS78, GLY79, GLY80, GLN99, LYS102, LYS114, ALA152, GLY153 and 7 more
  • 8S3D · Crystal structure of Medicago truncatula glutamate dehydrogenase 2 in complex with… · 8GL A505 · binds LYS66, GLY67, GLY68, MET87, LYS90, LYS102, ALA140, PRO141 and 8 more
  • 5XWC · Crystal structure of aspergillus niger glutamate dehydrogenase complexed with… · 8GL A502 · binds LYS78, GLY79, GLY80, GLN99, LYS102, LYS114, ALA152, GLY153 and 7 more

Residues it binds most

GLY 8, LYS 8, ASN 8, ALA 8, ARG 8, ASP 8, SER 8, THR 8, VAL 8, MET 6 (residue and the binding sites it lines).

Found with

  • PEG · Di(hydroxyethyl)ether
  • 2IT · (2Z)-2-iminopentanedioic acid
  • NAP · Nadp nicotinamide-adenine-dinucleotide phosphate
  • GOL · Glycerol
  • GLY · Glycine
  • NAD · Nicotinamide-adenine-dinucleotide
  • CA · Calcium ion
  • NA · Sodium ion
  • EDO · 1,2-ethanediol
  • PG4 · Tetraethylene glycol
  • PGE · Triethylene glycol

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