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Ligand · 6PZ

6PZ · 5,7-bisacetamido-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-non-2-ulopyranosonic acid

6PZ, 5,7-bisacetamido-3,5,7,9-tetradeoxy-L-glycero-alpha-L-manno-non-2-ulopyranosonic acid (C13 H22 N2 O8, 334.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within…

Component
6PZ
Formula
C13 H22 N2 O8
Class
sugar
Structures
3
PDB entries
2

Binding sites

6PZ in 3 structures; the first of them:

  • 5JSD · Crystal structure of phiAB6 tailspike in complex with five-repeated oligosaccharides of… · 6PZ D7 · binds HIS304, TYR333, ASN377, ALA378
  • 5JSE · Crystal structure of phiAB6 tailspike in complex with three-repeated oligosaccharides of… · 6PZ D7 · binds HIS304, TYR333, ASN377, ALA378
  • 5JSD · Crystal structure of PHIAB6 tailspike in complex with five-repeated oligosaccharides of… · 6PZ D7 · binds HIS304, TYR333, GLY334, ASN377, ALA378, GLY379, TYR340

Residues it binds most

TYR 9, ALA 9, ASN 9, HIS 9, GLY 3 (residue and the binding sites it lines).

Found with

  • 1GN · 2-amino-2-deoxy-beta-D-galactopyranose
  • BGC · beta-D-glucopyranose
  • GAL · beta-D-galactopyranose
  • ACY · Acetic acid
  • MLA · Malonic acid

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