GL1X · GenesisL1 explorer

Ligand · 5II

5II · methyl 2-deoxy-2-methyl-alpha-D-mannopyranoside

5II, methyl 2-deoxy-2-methyl-alpha-D-mannopyranoside (C8 H16 O5, 192.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the…

Component
5II
Formula
C8 H16 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

5II in 2 structures; the first of them:

  • 7FE1 · Crystal structure of GH92 alpha-1,2-mannosidase from Enterococcus faecalis ATCC 10100 in… · 5II A801 · binds TRP68, LEU358, MET359, GLU494, TYR540, ILE544, HIS545, GLU546 and 1 more
  • 7FE1 · Crystal structure of GH92 alpha-1,2-mannosidase from enterococcus faecalis atcc 10100 in… · 5II A801 · binds TRP68, GLU494, TYR540, ILE544, HIS545, GLU546, ASP602

Residues it binds most

GLU 8, ASP 8, HIS 8, TRP 8, TYR 8, ILE 5, MET 4, LEU 2 (residue and the binding sites it lines).

Found with

  • CA · Calcium ion
  • NA · Sodium ion
  • MAN · alpha-D-mannopyranose
  • ACY · Acetic acid
  • EDO · 1,2-ethanediol

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.