Ligand · 4YP

4YP · 2-amino-5-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-3-methoxy-6-methylcyclohexa-2,5-diene-1,4-dione

4YP, 2-amino-5-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-3-methoxy-6-methylcyclohexa-2,5-diene-1,4-dione (C18 H25 N O3, 303.4 g/mol), in the MolNFT structures on GenesisL1: bound in 1 record (1 PDB entry). Every binding site with its residues…

Component: 4YP
Formula: C18 H25 N O3
Class: ligand
Structures: 1
PDB entries: 1

Binding sites

4YP in 1 structure; the first of them:

5C2T · Crystal structure of Mitochondrial rhodoquinol-fumarate reductase from Ascaris suum with… · 4YP C202 · binds PRO193, SER194, TRP197, HIS240, ILE242, LEU60, TRP69, SER72 and 5 more

Residues it binds most

SER 2, TRP 2, ARG 2, ASP 2, GLY 2, HIS 2, ILE 2, LEU 2, PRO 2, TYR 2 (residue and the binding sites it lines).

Found with

EPH · L-alpha-phosphatidyl-beta-oleoyl-gamma-palmitoyl-phosphatidylethanolamine
F3S · FE3-S4 cluster
FAD · Flavin-adenine dinucleotide
FES · Fe2/s2 (inorganic) cluster
HEM · Protoporphyrin IX containing Fe
SF4 · Iron/sulfur cluster
MLI · Malonate ion

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