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Ligand · 3DT

3DT · 3-methylthymidine

3DT, 3-methylthymidine (C11 H16 N2 O5, 256.3 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (1 PDB entry). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component
3DT
Formula
C11 H16 N2 O5
Class
ligand
Structures
2
PDB entries
1

Binding sites

3DT in 2 structures; the first of them:

  • 3LFM · Crystal structure of the fat mass and obesity associated (FTO) protein reveals basis for… · 3DT A506 · binds ARG96, TYR106, TYR108, LEU109, VAL228, SER229, HIS231, HIS232 and 3 more
  • 3LFM · Crystal structure of the fat mass and obesity associated (fto) protein reveals basis for… · 3DT A506 · binds ARG96, TYR106, TYR108, LEU109, VAL228, SER229, HIS231, HIS232 and 3 more

Residues it binds most

ARG 2, HIS 2, TYR 2, ASP 2, GLU 2, LEU 2, SER 2, VAL 2 (residue and the binding sites it lines).

Found with

  • OGA · N-oxalylglycine
  • FE2 · Fe (II) ion

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