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Ligand · 2AD

2AD · 2'-amino-2'-deoxyadenosine

2AD, 2'-amino-2'-deoxyadenosine (C10 H14 N6 O3, 266.3 g/mol), in the MolNFT structures on GenesisL1: bound in 3 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found…

Component
2AD
Formula
C10 H14 N6 O3
Class
ligand
Structures
3
PDB entries
2

Binding sites

2AD in 3 structures; the first of them:

  • 1OBC · Leucyl-tRNA synthetase from thermus thermophilus complexed with a post-transfer editing… · 2AD A1816 · binds PHE246, THR247, THR248, ARG249, TYR327, VAL328, LEU329, TYR332 and 6 more
  • 1OBC · Leucyl-tRNA synthetase from thermus thermophilus complexed with a post-transfer editing… · 2AD A1816 · binds PHE246, THR247, THR248, ARG249, TYR327, VAL328, LEU329, TYR332 and 6 more
  • 2BTE · Thermus thermophilus leucyl-tRNA synthetase complexed with with a trnaleu transcript in… · 2AD A1893 · binds SER227, PHE246, THR247, THR248, ARG249, TYR327, VAL328, LEU329 and 8 more

Residues it binds most

GLY 4, THR 4, TYR 4, ARG 4, ALA 4, ASP 4, ILE 4, LEU 4, PHE 4, VAL 4 (residue and the binding sites it lines).

Found with

  • LEU · Leucine
  • NVA · Norvaline
  • ZN · Zinc ion
  • LMS · [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydro-2-furanyl]methyl sulfamate
  • HG · Mercury (II) ion
  • SO4 · Sulfate ion

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