Ligand · 060

060 · S-methyl-D-cysteine

060, S-methyl-D-cysteine (C4 H9 N O2 S, 135.2 g/mol), in the MolNFT structures on GenesisL1: bound in 2 records (2 PDB entries). Every binding site with its residues within 4.5 Å, the residues it binds most and the ligands found with it.

Component: 060
Formula: C4 H9 N O2 S
Class: ligand
Structures: 2
PDB entries: 2

Binding sites

060 in 2 structures; the first of them:

4JNA · Crystal structure of the deph complex with dimethyl-FK228 · 060 H3 · binds LEU198, MET267, PRO288, LEU289, DBU4, VAL5
7ROV · KRAS G12D mutant in complex with gmppcp and cyclic peptide mp-9903 · 060 E2 · binds HIS95, GLN99, ARG102, ALA1, PRO3, LEU4, TYR5, ILE6 and 3 more

Residues it binds most

LEU 4, PRO 4, VAL 4, ALA 2, ARG 2, ASP 2, CYS 2, DBU 2, GLN 2, HIS 2 (residue and the binding sites it lines).

Found with

GOL · Glycerol
1KC · (3S)-7-methylsulfanyl-3-oxidanyl-hept-4-enoic acid
DVA · D-valine
FAD · Flavin-adenine dinucleotide
GCP · Phosphomethylphosphonic acid guanylate ester
MG · Magnesium ion
CL · Chloride ion
PO4 · Phosphate ion
EDO · 1,2-ethanediol

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