MolNFT v2 · #22054 · protein
The crystal structure of staphylococcal nuclease refined at 1.7 ångströms resolution
1STN: “The crystal structure of staphylococcal nuclease refined at 1.7 ångströms resolution”. X-ray diffraction at 1.7, 1 pocket (best druggability 0.44). MolNFT v2 #22054 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1STN
- Type
- protein
- Length
- 136 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.7
- Source
- Staphylococcus aureus
- Molecule
- Staphylococcal nuclease
- EC
- 3.1.31.1
- UniProt
- P00644
- Pockets
- 1 · best druggability 0.44
Structure
x-ray diffraction · resolution 1.7 · 1 distinct chain · 26% helix, 34% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Staphylococcal nuclease (EC 3.1.31.1) | protein | 136 | 26% helix, 34% strand | P00644 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 129 | 0.44 | 0.77 | 16 | empty |
Compared structures
- 1STN · The crystal structure of staphylococcal nuclease refined at 1.7 ångströms resolution · the same entry in another collection · chain A against A, TM-score 1.00
- P00644 · AlphaFold monomer V2.0 prediction for thermonuclease (P00644) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00644
- Elsewhere: RCSB PDB 1STN · PDBe 1STN · UniProt P00644
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