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MolNFT v2 · #210444 · protein

MBP-Mcl1 in complex with ligand 12

8G3T: “MBP-Mcl1 in complex with ligand 12”. X-ray diffraction at 1.83, 2 ligands (YLK, GLC). MolNFT v2 #210444 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
8G3T
Type
protein
Length
518 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.83
Source
Homo sapiens; Serratia sp. FS14
UniProt
A0A4P1LXE0, Q07820
Ligands
YLK, GLC

Structure

x-ray diffraction · resolution 1.83 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein518—A0A4P1LXE0, Q07820

Ligands and binding sites

  • YLK · (1'S,3aS,5R,16R,17S,19Z,21R,21aR)-6'-chloro-20-fluoro-21-methoxy-16,17-dimethyl-2,3,3',3a,4',16,17,18,21,21a-decahydro-2'H,6H,8H-15lambda~6~-spiro[10,12-etheno-15lambda~6~-furo[3,2-i][1,4]oxazepino[3,4-f][1,2,7]thiadiazacyclohexadecine-7,1'-naphthalene]-13,15,15(4H,14H)-trione · ligand · chains A
  • GLC · alpha-D-glucopyranose · sugar · 2 copies · chains A
  • FMT · Formic acid · additive · chains A
  • EDO · 1,2-ethanediol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

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