MolNFT v2 · #197608 · protein
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35
7VA1: “Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with GDD-04-35”. X-ray diffraction at 1.74, 1 ligand (5YP). MolNFT v2 #197608 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7VA1
- Type
- protein
- Length
- 765 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.74
- Source
- Homo sapiens
- UniProt
- O43175
- Ligands
- 5YP
Structure
x-ray diffraction · resolution 1.74 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, D | — | protein | 190 | — | O43175 |
| A | — | protein | 193 | — | O43175 |
| C | — | protein | 192 | — | O43175 |
Ligands and binding sites
- 5YP · 4-[(3-ethanoylphenyl)sulfamoyl]-~{N}-[4-(3-fluorophenyl)-1,3-thiazol-2-yl]benzamide · ligand · 4 copies · chains B, A, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O43175
- Elsewhere: RCSB PDB 7VA1 · PDBe 7VA1 · UniProt O43175
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