MolNFT v2 · #197509 · protein

Crystal structure of HPPD complexed with Y18556

7V6X: “Crystal structure of HPPD complexed with Y18556”. X-ray diffraction at 1.8, 2 ligands (5RJ, CO). MolNFT v2 #197509 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7V6X
Type: protein
Length: 379 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.8
Source: Arabidopsis thaliana
UniProt: P93836
Ligands: 5RJ, CO

Structure

x-ray diffraction · resolution 1.8 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	379	—	P93836

Ligands and binding sites

5RJ · 5-methyl-3-[(2-methylphenyl)methyl]-6-[(1~{R},2~{S})-2-oxidanyl-6-oxidanylidene-cyclohexyl]carbonyl-1,2,3-benzotriazin-4-one · ligand · chains A
CO · Cobalt (II) ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7V6X · Crystal structure of hppd complexed with Y18556 · the same entry in another collection · chain A against A, TM-score 1.00
P93836 · AlphaFold monomer V2.0 prediction for 4-hydroxyphenylpyruvate dioxygenase (P93836) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P93836
Elsewhere: RCSB PDB 7V6X · PDBe 7V6X · UniProt P93836

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