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MolNFT v2 · #187026 · protein

Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2

7MK4: “Co-bound crystal structure of the engineered cyt cb562 variant, DiCyt2”. X-ray diffraction at 1.27, 2 ligands (HEC, CO). MolNFT v2 #187026 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7MK4
Type
protein
Length
212 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.27
Source
Escherichia coli
UniProt
P0ABE7
Ligands
HEC, CO

Structure

x-ray diffraction · resolution 1.27 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein106—P0ABE7

Ligands and binding sites

  • HEC · Heme C · ligand · 2 copies · chains A, B
  • CO · Cobalt (II) ion · metal · 2 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7MK4 · Co-bound crystal structure of the engineered cyt CB562 variant, DICYT2 · the same entry in another collection · chain A against A, TM-score 1.00
  • P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain B against A, TM-score 0.95

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