MolNFT v2 · #180016 · protein

Crystal structure of LI-Cadherin EC1-2

7EV1: “Crystal structure of LI-Cadherin EC1-2”. X-ray diffraction at 1.38, 2 ligands (CA, NA). MolNFT v2 #180016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 7EV1
Type: protein
Length: 416 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.38
Source: Homo sapiens
UniProt: Q12864
Ligands: CA, NA

Structure

x-ray diffraction · resolution 1.38 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	208	—	Q12864

Ligands and binding sites

CA · Calcium ion · metal · 6 copies · chains A, B
NA · Sodium ion · metal
ACT · Acetate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

7EV1 · Crystal structure of li-cadherin EC1-2 · the same entry in another collection · chain A against A, TM-score 1.00
Q12864 · AlphaFold monomer V2.0 prediction for cadherin-17 (Q12864) · a predicted model of the same protein · chain B against A, TM-score 0.94

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q12864
Elsewhere: RCSB PDB 7EV1 · PDBe 7EV1 · UniProt Q12864

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