MolNFT v2 · #177509 · protein
Crystal structure of Thermococcus kodakaraensis aconitase X (apo-form)
7CNR: “Crystal structure of Thermococcus kodakaraensis aconitase X (apo-form)”. X-ray diffraction at 3.39, 1 ligand (F3S). MolNFT v2 #177509 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7CNR
- Type
- protein
- Length
- 2,063 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.39
- Source
- Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
- UniProt
- Q5JGJ6, Q5JGJ7
- Ligands
- F3S
Structure
x-ray diffraction · resolution 3.39 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | — | protein | 386 | — | Q5JGJ6 |
| B, H | — | protein | 131 | — | Q5JGJ7 |
| D | — | protein | 129 | — | Q5JGJ7 |
| F | — | protein | 128 | — | Q5JGJ7 |
Ligands and binding sites
- F3S · FE3-S4 cluster · ligand · 4 copies · chains A, C, E, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7CNR · Crystal structure of thermococcus kodakaraensis aconitase X (apo-form) · the same entry in another collection · chain H against H, TM-score 1.00
- Q5JGJ7 · AlphaFold monomer V2.0 prediction for UPF0107 protein TK1248 (Q5JGJ7) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JGJ6
- Every structure of UniProt Q5JGJ7
- Elsewhere: RCSB PDB 7CNR · PDBe 7CNR · UniProt Q5JGJ6 · UniProt Q5JGJ7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.