GL1X · GenesisL1 explorer

MolNFT v1 · #175344 · protein

Crystal structure of thermococcus kodakaraensis aconitase X (apo-form)

7CNR: “Crystal structure of thermococcus kodakaraensis aconitase X (apo-form)”. X-ray diffraction, 1 ligand (F3S). MolNFT v1 #175344 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
7CNR
Type
protein
Length
2,063 residues
Chains
8
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
Q5JGJ6, Q5JGJ7
Ligands
F3S

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, C, E, G—protein386—Q5JGJ6
B, H—protein131—Q5JGJ7
D—protein129—Q5JGJ7
F—protein128—Q5JGJ7

Ligands and binding sites

  • F3S · FE3-S4 cluster · ligand · 4 copies · chains A, C, E, G

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 7CNR · Crystal structure of Thermococcus kodakaraensis aconitase X (apo-form) · the same entry in another collection · chain H against H, TM-score 1.00
  • Q5JGJ7 · AlphaFold monomer V2.0 prediction for UPF0107 protein TK1248 (Q5JGJ7) · a predicted model of the same protein · chain D against A, TM-score 0.99

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