MolNFT v2 · #176359 · protein
Notum Fragment_130_methyEster (methyl 4H-thieno[3,2-c]chromene-2-carboxylate)
7BO5: “Notum Fragment_130_methyEster (methyl 4H-thieno[3,2-c]chromene-2-carboxylate)”. X-ray diffraction at 1.38, 3 ligands (U65, NAG, SO4). MolNFT v2 #176359 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 7BO5
- Type
- protein
- Length
- 343 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.38
- Source
- Homo sapiens
- UniProt
- Q6P988
- Ligands
- U65, NAG, SO4
Structure
x-ray diffraction · resolution 1.38 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 343 | — | Q6P988 |
Ligands and binding sites
- U65 · methyl 3~{a},4-dihydro-3~{H}-thieno[3,2-c]chromene-2-carboxylate · ligand · chains A
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A
- SO4 · Sulfate ion · ion · 6 copies · chains A
- DMS · Dimethyl sulfoxide · additive · 2 copies · chains A
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 7BO5 · Notum FRAGMENT_130_METHYESTER (methyl 4H-THIENO[3,2-C]CHROMENE-2- carboxylate) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6P988
- Elsewhere: RCSB PDB 7BO5 · PDBe 7BO5 · UniProt Q6P988
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