MolNFT v2 · #173901 · protein
1.65 A resolution 4,5-dimethylcatechol (4,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease
6ZO2: “1.65 A resolution 4,5-dimethylcatechol (4,5-dimethylbenzene-1,2-diol) inhibited Sporosarcina pasteurii urease”. X-ray diffraction at 1.65, 3 ligands (NI, SO4, OH). MolNFT v2 #173901 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6ZO2
- Type
- protein
- Length
- 792 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.65
- Source
- Sporosarcina pasteurii
- UniProt
- A0A0H3YGY5, P41021, A0A0H3YL32
- Ligands
- NI, SO4, OH
Structure
x-ray diffraction · resolution 1.65 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| AAA | — | protein | 100 | — | A0A0H3YGY5 |
| BBB | — | protein | 122 | — | P41021 |
| CCC | — | protein | 570 | — | A0A0H3YL32 |
Ligands and binding sites
- NI · Nickel (II) ion · metal · 2 copies · chains CCC
- SO4 · Sulfate ion · ion · 11 copies · chains AAA, CCC, BBB
- OH · Hydroxide ion · ion · chains CCC
- EDO · 1,2-ethanediol · additive · 24 copies · chains AAA, BBB, CCC
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3YGY5
- Every structure of UniProt P41021
- Every structure of UniProt A0A0H3YL32
- Elsewhere: RCSB PDB 6ZO2 · PDBe 6ZO2 · UniProt A0A0H3YGY5 · UniProt P41021 · UniProt A0A0H3YL32
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