MolNFT v2 · #172754 · protein
Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol epoxide inhibitor
6YQ9: “Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol epoxide inhibitor”. X-ray diffraction at 1.55, 3 ligands (NAG, 5QP, CA). MolNFT v2 #172754 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6YQ9
- Type
- protein
- Length
- 952 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.55
- Source
- Aspergillus oryzae
- UniProt
- A0A1S9DH83
- Ligands
- NAG, 5QP, CA
Structure
x-ray diffraction · resolution 1.55 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| AAA, BBB | — | protein | 476 | — | A0A1S9DH83 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains AAA, BBB
- 5QP · (1R,2R,3S,5R,6S)-2,3,5-trihydroxy-6-(hydroxymethyl)cyclohexyl alpha-D-glucopyranoside · sugar · 2 copies · chains AAA, BBB
- CA · Calcium ion · metal · 2 copies · chains AAA, BBB
- EDO · 1,2-ethanediol · additive · 4 copies · chains AAA, BBB
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1S9DH83
- Elsewhere: RCSB PDB 6YQ9 · PDBe 6YQ9 · UniProt A0A1S9DH83
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