MolNFT v2 · #172421 · protein
tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with (E)-N-ethyl-4-oxo-4-phenylbut-2-enamide
6YGV: “tRNA-Guanine Transglycosylase (TGT) in co-crystallized complex with (E)-N-ethyl-4-oxo-4-phenylbut-2-enamide”. X-ray diffraction at 1.63, 2 ligands (OQH, ZN). MolNFT v2 #172421 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6YGV
- Type
- protein
- Length
- 367 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.63
- Source
- Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
- UniProt
- P28720
- Ligands
- OQH, ZN
Structure
x-ray diffraction · resolution 1.63 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 367 | — | P28720 |
Ligands and binding sites
- OQH · ~{N}-ethyl-4-oxidanylidene-4-phenyl-butanamide · ligand · chains A
- ZN · Zinc ion · metal · chains A
- GOL · Glycerol · additive · 5 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6YGV · TRNA-guanine transglycosylase (tgt) in co-crystallized complex with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28720
- Elsewhere: RCSB PDB 6YGV · PDBe 6YGV · UniProt P28720
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