MolNFT v2 · #168662 · protein

Crystal structure of E.coli RppH in complex with UTP

6VCP: “Crystal structure of E.coli RppH in complex with UTP”. X-ray diffraction at 1.7, 1 ligand (UTP). MolNFT v2 #168662 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6VCP
Type: protein
Length: 158 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.7
Source: Escherichia coli S88
UniProt: P0A776
Ligands: UTP

Structure

x-ray diffraction · resolution 1.7 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	158	—	P0A776

Ligands and binding sites

UTP · Uridine 5'-triphosphate · ligand · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6VCP · Crystal structure of E.COLI rpph in complex with UTP · the same entry in another collection · chain A against A, TM-score 1.00
P0A776 · AlphaFold monomer V2.0 prediction for RNA pyrophosphohydrolase (P0A776) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A776
Elsewhere: RCSB PDB 6VCP · PDBe 6VCP · UniProt P0A776

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