MolNFT v2 · #167629 · protein
Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with 6-[(3-aminopropyl)amino]-N-hydroxyhexanamide
6UHV: “Crystal Structure of Danio rerio Histone Deacetylase 10 in Complex with…”. X-ray diffraction at 2.53, 4 ligands (XS6, K, ZN). MolNFT v2 #167629 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6UHV
- Type
- protein
- Length
- 617 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.53
- Source
- Danio rerio
- UniProt
- F1QCV2
- Ligands
- XS6, K, ZN, PO4
Structure
x-ray diffraction · resolution 2.53 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 617 | — | F1QCV2 |
Ligands and binding sites
- XS6 · 6-[(3-aminopropyl)amino]-N-hydroxyhexanamide · ligand · chains A
- K · Potassium ion · metal · 2 copies · chains A
- ZN · Zinc ion · metal · chains A
- PO4 · Phosphate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6UHV · Crystal structure of danio rerio histone deacetylase 10 in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- F1QCV2 · AlphaFold monomer V2.0 prediction for polyamine deacetylase HDAC10 (F1QCV2) · a predicted model of the same protein · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F1QCV2
- Elsewhere: RCSB PDB 6UHV · PDBe 6UHV · UniProt F1QCV2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.