MolNFT v2 · #166218 · protein
3C-like protease from Southampton virus complexed with XST00000642b.
6TCF: “3C-like protease from Southampton virus complexed with XST00000642b.”. X-ray diffraction at 1.79, 2 ligands (N1E, PO4). MolNFT v2 #166218 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6TCF
- Type
- protein
- Length
- 343 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.79
- Source
- Southampton virus (serotype 3)
- UniProt
- Q04544
- Ligands
- N1E, PO4
Structure
x-ray diffraction · resolution 1.79 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 172 | — | Q04544 |
| B | — | protein | 171 | — | Q04544 |
Ligands and binding sites
- N1E · methyl quinoline-6-carboxylate · ligand · chains B
- PO4 · Phosphate ion · ion · chains A
- DMS · Dimethyl sulfoxide · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6TCF · 3C-like protease from southampton virus complexed with XST00000642B. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04544
- Elsewhere: RCSB PDB 6TCF · PDBe 6TCF · UniProt Q04544
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