MolNFT v2 · #164143 · protein

TR-SMX closed state structure (0-5ms) of bacteriorhodopsin

6RNJ: “TR-SMX closed state structure (0-5ms) of bacteriorhodopsin”. X-ray diffraction at 2.6, 1 ligand (RET). MolNFT v2 #164143 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6RNJ
Type: protein
Length: 229 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 2.6
Source: Halobacterium salinarum NRC-1
UniProt: P02945
Ligands: RET

Structure

x-ray diffraction · resolution 2.6 · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	229	—	P02945

Ligands and binding sites

RET · Retinal · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6RNJ · Tr-smx closed state structure (0-5MS) of bacteriorhodopsin · the same entry in another collection · chain A against A, TM-score 1.00
P02945 · AlphaFold monomer V2.0 prediction for bacteriorhodopsin (P02945) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P02945
Elsewhere: RCSB PDB 6RNJ · PDBe 6RNJ · UniProt P02945

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