MolNFT v2 · #164142 · protein
DPP1 in complex with inhibitor
6RNI: “DPP1 in complex with inhibitor”. X-ray diffraction at 1.54, 3 ligands (KAQ, NAG, CL). MolNFT v2 #164142 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6RNI
- Type
- protein
- Length
- 349 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.54
- Source
- Homo sapiens
- UniProt
- P53634
- Ligands
- KAQ, NAG, CL
Structure
x-ray diffraction · resolution 1.54 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 118 | — | P53634 |
| B | — | protein | 163 | — | P53634 |
| C | — | protein | 68 | — | P53634 |
Ligands and binding sites
- KAQ · (2~{S},4~{S})-~{N}-[(2~{S})-1-azanyl-3-[4-(4-cyanophenyl)phenyl]propan-2-yl]-4-methylsulfanyl-pyrrolidine-2-carboxamide · ligand · chains A, B, C
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A, C, B
- CL · Chloride ion · ion · chains B, C
- DMS · Dimethyl sulfoxide · additive · 4 copies · chains A, B, C
- ACT · Acetate ion · additive · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53634
- Elsewhere: RCSB PDB 6RNI · PDBe 6RNI · UniProt P53634
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