MolNFT v2 · #161109 · protein
Human IGG1 Fc fragment, C239 insertion mutant
6P6D: “Human IGG1 Fc fragment, C239 insertion mutant”. X-ray diffraction at 2.31, 4 ligands (NAG, MAN, BMA). MolNFT v2 #161109 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6P6D
- Type
- protein
- Length
- 418 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.31
- Source
- Homo sapiens
- UniProt
- Q6MZV7
- Ligands
- NAG, MAN, BMA, FUC
Structure
x-ray diffraction · resolution 2.31 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 209 | — | Q6MZV7 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 8 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar · 4 copies · chains A, B
- BMA · beta-D-mannopyranose · sugar · 2 copies · chains A, B
- FUC · alpha-L-fucopyranose · sugar · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6P6D · Human IGG1 Fc fragment, C239 insertion mutant · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6MZV7
- Elsewhere: RCSB PDB 6P6D · PDBe 6P6D · UniProt Q6MZV7
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