MolNFT v2 · #158866 · protein
Crystal Structure of Ebola zaire GP protein with bound ARN0074898
6NAE: “Crystal Structure of Ebola zaire GP protein with bound ARN0074898”. X-ray diffraction at 2.75, 4 ligands (KHG, NAG, MAN). MolNFT v2 #158866 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6NAE
- Type
- protein
- Length
- 355 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.75
- Source
- Zaire ebolavirus (strain Mayinga-76)
- UniProt
- Q05320
- Ligands
- KHG, NAG, MAN, BMA
Structure
x-ray diffraction · resolution 2.75 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 238 | — | Q05320 |
| B | — | protein | 117 | — | Q05320 |
Ligands and binding sites
- KHG · (1S,3R,5R,7S)-N-(trans-4-aminocyclohexyl)-3-methyl-5-phenyltricyclo[3.3.1.1~3,7~]decane-1-carboxamide · ligand · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 6 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar
- GOL · Glycerol · additive · 5 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6NAE · Crystal structure of ebola zaire gp protein with bound ARN0074898 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q05320
- Elsewhere: RCSB PDB 6NAE · PDBe 6NAE · UniProt Q05320
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.