MolNFT v2 · #158664 · protein
The crystal structure of neuramindase from A/canine/IL/11613/2015 (H3N2) influenza virus.
6N4D: “The crystal structure of neuramindase from A/canine/IL/11613/2015 (H3N2) influenza virus.”. X-ray diffraction at 1.8, 4 ligands (NAG, MAN, BMA). MolNFT v2 #158664 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6N4D
- Type
- protein
- Length
- 1,552 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.8
- Source
- unidentified influenza virus
- UniProt
- A0A0H3YBU9
- Ligands
- NAG, MAN, BMA, CA
Structure
x-ray diffraction · resolution 1.8 · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 388 | — | A0A0H3YBU9 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 20 copies · chains A, D, B, C
- MAN · alpha-D-mannopyranose · sugar · 12 copies · chains B, D, C
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains D, C
- CA · Calcium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6N4D · The crystal structure of neuramindase from A/CANINE/IL/11613/2015 (H3N2) influenza virus. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3YBU9
- Elsewhere: RCSB PDB 6N4D · PDBe 6N4D · UniProt A0A0H3YBU9
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