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MolNFT v2 · #157731 · DNA

Crystal structure of a tetrameric DNA fold-back quadruplex

6MC4: “Crystal structure of a tetrameric DNA fold-back quadruplex”. X-ray diffraction at 2.25, 2 ligands (CA, K). MolNFT v2 #157731 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6MC4
Type
DNA
Length
72 nucleotides
Chains
8
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.25
Ligands
CA, K

Structure

x-ray diffraction · resolution 2.25 · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D, E, F, G, H—dna9——

Ligands and binding sites

  • CA · Calcium ion · metal · 10 copies · chains A, C, D, E, F, H
  • K · Potassium ion · metal · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6MC4 · Crystal structure of a tetrameric DNA fold-back quadruplex · the same entry in another collection · chain A against A, TM-score 1.00

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