MolNFT v2 · #157046 · protein
A third intermediate state of L,D-transpeptidase LdtMt2-ertapenem adduct
6LQB: “A third intermediate state of L,D-transpeptidase LdtMt2-ertapenem adduct”. X-ray diffraction at 1.7. MolNFT v2 #157046 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LQB
- Type
- protein
- Length
- 533 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.7
- Source
- Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
- UniProt
- I6Y9J2
Structure
x-ray diffraction · resolution 1.7 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 268 | — | I6Y9J2 |
| B | — | protein | 265 | — | I6Y9J2 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6LQB · A third intermediate state of L,D-transpeptidase LDTMT2-ertapenem adduct · the same entry in another collection · chain A against A, TM-score 1.00
- I6Y9J2 · AlphaFold monomer V2.0 prediction for L,D-transpeptidase 2 (I6Y9J2) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt I6Y9J2
- Elsewhere: RCSB PDB 6LQB · PDBe 6LQB · UniProt I6Y9J2
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