MolNFT v2 · #156506 · protein
High resolution crystal structure of crustacean hemocyanin.
6L8S: “High resolution crystal structure of crustacean hemocyanin.”. X-ray diffraction at 1.58, 6 ligands (NAG, CU, MG). MolNFT v2 #156506 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6L8S
- Type
- protein
- Length
- 1,950 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.58
- Source
- Panulirus japonicus
- Ligands
- NAG, CU, MG, O, SO4, CL
Structure
x-ray diffraction · resolution 1.58 · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 650 | — | — |
| B | — | protein | 650 | — | — |
| C | — | protein | 650 | — | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A, B
- CU · Copper (II) ion · metal · 6 copies · chains A, B, C
- MG · Magnesium ion · metal · 5 copies · chains A, B, C
- O · Oxygen atom · ion · 6 copies · chains A, B, C
- SO4 · Sulfate ion · ion · 3 copies · chains A, B, C
- CL · Chloride ion · ion · chains B
- EDO · 1,2-ethanediol · additive · 17 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6L8S · High resolution crystal structure of crustacean hemocyanin. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6L8S · PDBe 6L8S
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