MolNFT v2 · #155956 · protein
Crystal structure of the liprin-alpha3_SAM123/LAR_D1D2 complex
6KR4: “Crystal structure of the liprin-alpha3_SAM123/LAR_D1D2 complex”. X-ray diffraction at 2.85, 1 ligand (PO4). MolNFT v2 #155956 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KR4
- Type
- protein
- Length
- 3,065 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.85
- Source
- Homo sapiens; Mus musculus
- UniProt
- P10586, P60469
- Ligands
- PO4
Structure
x-ray diffraction · resolution 2.85 · 8 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 575 | — | P10586 |
| B | — | protein | 571 | — | P10586 |
| C | — | protein | 575 | — | P10586 |
| D | — | protein | 568 | — | P10586 |
| E | — | protein | 266 | — | P60469 |
| F | — | protein | 264 | — | P60469 |
| H | — | protein | 231 | — | P60469 |
| G | — | protein | 15 | — | P60469 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 5 copies · chains A, B, C, D, E
- PG4 · Tetraethylene glycol · additive · 3 copies · chains A, B, C
- PGE · Triethylene glycol · additive · 2 copies · chains C, D
- P6G · Hexaethylene glycol · additive · chains D, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KR4 · Crystal structure of the liprin-ALPHA3_SAM123/LAR_D1D2 complex · the same entry in another collection · chain H against H, TM-score 1.00
- P10586 · AlphaFold monomer V2.0 prediction for receptor-type tyrosine-protein phosphatase F… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P10586
- Every structure of UniProt P60469
- Elsewhere: RCSB PDB 6KR4 · PDBe 6KR4 · UniProt P10586 · UniProt P60469
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