MolNFT v2 · #155724 · protein
Xylanase J from Bacillus sp. strain 41M-1
6KJL: “Xylanase J from Bacillus sp. strain 41M-1”. X-ray diffraction at 2.45, 1 ligand (CA). MolNFT v2 #155724 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KJL
- Type
- protein
- Length
- 655 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.45
- Source
- Bacillus sp. 41M-1
- UniProt
- Q9RC94
- Ligands
- CA
Structure
x-ray diffraction · resolution 2.45 · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 328 | — | Q9RC94 |
| B | — | protein | 327 | — | Q9RC94 |
Ligands and binding sites
- CA · Calcium ion · metal · 4 copies · chains A, B
- GOL · Glycerol · additive · 10 copies · chains A, B
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 6 copies · chains A, B
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KJL · Xylanase J from bacillus sp. strain 41M-1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9RC94
- Elsewhere: RCSB PDB 6KJL · PDBe 6KJL · UniProt Q9RC94
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