MolNFT v2 · #155520 · protein + DNA
Crystal structure of human DNMT3B-DNMT3L in complex with DNA containing CpGpG site
6KDA: “Crystal structure of human DNMT3B-DNMT3L in complex with DNA containing CpGpG site”. X-ray diffraction at 2.909. MolNFT v2 #155520 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KDA
- Type
- protein + DNA
- Length
- 991 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.909
- Source
- Homo sapiens; SYNTHETIC CONSTRUCT
- UniProt
- Q9UBC3, Q9UJW3
Structure
x-ray diffraction · resolution 2.909 · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 285 | — | Q9UBC3 |
| B | — | protein | 188 | — | Q9UJW3 |
| C | — | protein | 183 | — | Q9UJW3 |
| E, F | — | dna | 25 | — | — |
Compared structures
- 6KDA · Crystal structure of human DNMT3B-DNMT3L in complex with DNA containing cpgpg site · the same entry in another collection · chain F against F, TM-score 1.00
- Q9UBC3 · AlphaFold monomer V2.0 prediction for DNA (cytosine-5)-methyltransferase 3B (Q9UBC3) · a predicted model of the same protein · chain A against A, TM-score 0.99
- Q9UJW3 · AlphaFold monomer V2.0 prediction for DNA (cytosine-5)-methyltransferase 3-like (Q9UJW3) · a predicted model of the same protein · chain C against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UBC3
- Every structure of UniProt Q9UJW3
- Elsewhere: RCSB PDB 6KDA · PDBe 6KDA · UniProt Q9UBC3 · UniProt Q9UJW3
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