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MolNFT v2 · #155246 · protein

Crystal structure of the PI5P4Kbeta-AMPPNP complex

6K4H: “Crystal structure of the PI5P4Kbeta-AMPPNP complex”. X-ray diffraction at 2.55, 1 ligand (ANP). MolNFT v2 #155246 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6K4H
Type
protein
Length
620 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.55
Source
Homo sapiens
UniProt
P78356
Ligands
ANP

Structure

x-ray diffraction · resolution 2.55 · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein319—P78356
B—protein301—P78356

Ligands and binding sites

  • ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6K4H · Crystal structure of the PI5P4KBETA-amppnp complex · the same entry in another collection · chain A against A, TM-score 1.00
  • P78356 · AlphaFold monomer V2.0 prediction for phosphatidylinositol 5-phosphate 4-kinase type-2… · a predicted model of the same protein · chain A against A, TM-score 0.99

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